KEGG   Rattus norvegicus (rat): 83731
Entry
83731             CDS       T01003                                 
Symbol
Kcnma1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform 1
  KO
K04936  potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04022  cGMP-PKG signaling pathway
rno04270  Vascular smooth muscle contraction
rno04911  Insulin secretion
rno04924  Renin secretion
rno04970  Salivary secretion
rno04972  Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04022 cGMP-PKG signaling pathway
    83731 (Kcnma1)
 09150 Organismal Systems
  09152 Endocrine system
   04911 Insulin secretion
    83731 (Kcnma1)
   04924 Renin secretion
    83731 (Kcnma1)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    83731 (Kcnma1)
  09154 Digestive system
   04970 Salivary secretion
    83731 (Kcnma1)
   04972 Pancreatic secretion
    83731 (Kcnma1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    83731 (Kcnma1)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Potassium channel, calcium- and sodium-activated (KCa/KNa)
   83731 (Kcnma1)
SSDB
Motif
Pfam: Slowpoke_C BK_channel_a Ion_trans Ion_trans_2 TrkA_N
Other DBs
NCBI-GeneID: 83731
NCBI-ProteinID: NP_114016
RGD: 620715
Ensembl: ENSRNOG00000005985
UniProt: Q62976
Position
15:351065..1057117
AA seq 1242 aa
MANGGGGGGGGSSGSSGGGGGGGGGSGLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSS
VHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH
CGGKTKEAQKINNGSSQADGTLKPVDEKEEVVAAEVGWMTSVKDWAGVMISAQTLTGRVL
VVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKL
WFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKL
VNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYA
KTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLES
VSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK
IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSW
NWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNE
MYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRSRKRILINPGNHLKIQE
GTLGFFIASDAKEVKRAFFYCKACHDDVTDPKRIKKCGCRRLIYSKMSIYKRMSRACCFD
CGRSERDCSCMSGRVRGNVDTLERNFPLSSVSVNDCSTSFRAFEDEQPPTLSPKKKQRNG
GMRNSPNTSPKLMRHDPLLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILTRSEA
AMTVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETL
HNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSM
QFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQF
LDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELE
ALIAEENALRGGYSTPQTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNML
CFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSS
HSSQSSSKKSSSVHSIPSTANRPNRPKSRESRDKQKKEMVYR
NT seq 3729 nt   +upstreamnt  +downstreamnt
atggcaaacggtggcggcggcggcggcggcggcagcagcggcagcagcggcggcggcggc
ggcggcggcggaggcagcggtcttagaatgagcagcaatatccacgcgaaccatctcagc
ctagacgcgtcctcttcttcctcctcctcttcttcctcctcctcttcctcctcgtcctcg
gtccacgagcccaagatggatgcgctcatcatcccggtgaccatggaggtgccgtgcgac
agccggggccaacgcatgtggtgggctttcttggcctcctccatggtgactttcttcggg
ggcctcttcatcatcttgctctggcggactctcaagtacctgtggaccgtttgctgccac
tgcgggggcaagacgaaggaggcccagaagataaacaatggctccagccaggcagatggt
actctcaagccagtggatgaaaaagaggaggtggtggcagccgaggtcggctggatgaca
tctgtgaaggactgggcaggggtgatgatatctgcccagacactgactggcagagtcctg
gttgtgttagtctttgctctcagcattggtgcccttgtaatatacttcatagactcatca
aacccaatagaatcctgccagaatttctacaaagatttcacattacagatcgacatggct
ttcaacgtgttcttccttctctactttggcttgcggtttattgcagccaatgataagctg
tggttctggctggaagtgaattctgtagtagatttcttcacagtccctcccgtgtttgtg
tctgtatacttaaacagaagttggcttggcttgagatttttaagagctctcagactgatt
cagttttcagaaattttgcagtttctgaatatccttaaaacaagtaattccatcaagctg
gtgaacctgctctccatatttatcagcacgtggctgactgcagctggattcatccacttg
gtggagaattcaggggacccatgggaaaatttccaaaacaaccaggcacttacgtactgg
gaatgtgtctacttactcatggtcacaatgtctacagtgggttacggggatgtttatgca
aaaaccacgcttggacgcctcttcatggtcttcttcatcctcgggggactggccatgttt
gccagctacgtccctgaaatcatagagttaataggaaaccgcaagaaatacgggggctcc
tatagcgcggttagtggaagaaagcacattgtagtctgtgggcacattactctggagagt
gtctctaacttcctgaaggactttctgcacaaggaccgggatgatgtcaacgtggagatt
gtttttcttcacaacatctcccctaaccttgagcttgaggctctgttcaaacggcatttc
actcaggtggagttttatcagggctctgtcctcaatccacacgatcttgccagagtcaag
atagagtcagcagatgcatgtttgatccttgccaataagtactgcgctgacccggatgca
gaagatgcctccaacatcatgagagtgatctccataaagaactaccacccaaagatcagg
atcatcactcagatgctgcagtatcacaacaaggcccatctgctcaacatccccagctgg
aactggaaagagggtgatgacgcaatatgccttgcagagctcaagttgggtttcatagcc
cagagctgtctggctcaaggcctctccacaatgcttgccaatctcttctctatgaggtca
ttcataaagattgaggaagatacatggcagaaatactacttggaaggagtctccaatgaa
atgtacacagaatatctttccagtgccttcgtgggtctgtccttccctactgtttgtgag
ctgtgttttgtgaagcttaagctcctgatgatagccattgagtacaagtctgccaacagg
gagagccgaagccgaaagcgaatattaattaaccctgggaaccaccttaagatccaagaa
ggtactttaggatttttcatcgcaagtgatgccaaagaagttaaaagggcatttttttac
tgcaaggcctgtcatgatgacgtcacagatcccaaaagaattaaaaaatgcggctgcagg
cggctgatctattccaagatgtccatctacaagagaatgagccgagcatgttgttttgat
tgcggacgttctgagcgtgactgctcgtgcatgtcaggccgtgtgcgtggtaacgtggac
acccttgagagaaacttcccgctttcttctgtctctgttaatgattgctccaccagtttc
cgtgcctttgaagatgagcaaccgccaacactgtcaccaaaaaaaaaacaacgtaatggg
ggcatgaggaactcacccaacacatccccgaagctgatgaggcatgaccccttgttaatt
cctggcaacgatcagattgacaacatggactccaatgtgaaaaagtacgactccactgga
atgtttcactggtgcgcacccaaggagattgagaaagtcatcttgactcgaagtgaagct
gccatgactgtcctgagtggtcatgttgtagtctgcatctttggggatgtcagctcagcc
ctgattggcctccggaacctggtgatgccgcttcgtgctagcaattttcactatcatgag
ctcaaacacattgtgtttgtgggctccatcgagtacctcaagcgggagtgggaaacactg
cacaacttccccaaagtatccatattgcctggtacgccattaagtcgggctgatttaagg
gctgtcaacatcaacctctgtgacatgtgcgttatcctgtcagccaatcagaataatatt
gatgatacttcgcttcaggacaaggaatgcatcttggcgtcactcaacatcaaatctatg
cagtttgatgacagcatcggggtcttgcaggctaattcccaaggattcacacctcctgga
atggacagatcatcacctgacaacagcccagtgcacgggatgttacgccagccgtccatc
acaaccggagtcaacattcccatcatcacggaactcgtgaacgatactaatgttcagttt
ttggaccaagacgatgatgatgaccctgacacagagctgtacctcacacagccctttgct
tgtgggacagcatttgccgttagcgtcctggactcactcatgagcgcgacatacttcaat
gacaatatcctcaccctaatacggaccctggtgacaggaggagccacgccagagctcgaa
gctttaatagctgaggagaatgcacttcgagggggttacagcactccgcagacactagcc
aacagggaccgctgccgagtggcccagttagccctgttggatgggccctttgcggactta
ggggatggtggttgttatggtgatctgttctgcaaagctctgaaaacatataacatgctt
tgttttggaatttaccggctgagagatgcccacctcagcacccccagccagtgtacaaaa
aggtacgtcatcaccaatcccccctacgagtttgaactcgtaccgacagacctgatcttc
tgcctgatgcagtttgaccacaacgctggccaatcccgggccagtctgtctcattcctcc
cactcctcacagtcgtccagtaagaagagctcctctgtccactccatcccgtccacagca
aatcggccaaaccggcccaagtccagggagtcccgcgacaaacagaaaaaagaaatggtt
tacagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (38)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (36)   
DNA sequence (74)   
   RefSeq(nuc) (36)   
   GenBank (19)   
   EMBL (19)   
Protein domain (5)   
   Pfam (5)   
All databases (132)   

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